BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F04SP1|AL430084
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig591 1766 0.0
>3x_Contig591
Length = 1630
Score = 1766 bits (886), Expect = 0.0
Identities = 916/929 (98%), Gaps = 2/929 (0%)
Strand = Plus / Minus
Query: 1 gatcttttcgcaaaatcgttaaactgcgttgtaaatcctcttttctgcactgagatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 gatcttttcgcaaaatcgttaaactgcgttgtaaatcctcttttctgcactgagatggat 1443
Query: 61 agaatatctttgtttgctacgaccacaacaggggtaccgccagtagcagtaacataccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 agaatatctttgtttgctacgaccacaacaggggtaccgccagtagcagtaacataccaa 1383
Query: 121 tcgaatatattttgcatgaaccccactttaatcatacccatggaccattggaaattttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 tcgaatatattttgcatgaaccccactttaatcatacccatggaccattggaaattttgg 1323
Query: 181 gtccaagcggcagcrgtaggtgggacacgcgccacacccatcatcgaagtgatagccaaa 240
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 gtccaagcggcagcgataggtgggacacgcgccacacccatcatcgaagtgatagccaaa 1263
Query: 241 ttttggaagtacacaaacaatgagatggagtkagaagcaatatgagcagctgtggtggaa 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1262 ttttggaagtacacaaacaatgagatggagttagaagcaatatgagcagctgtggtggaa 1203
Query: 301 tgtccaataactgaracgatagctgacgtgataacacccaatcctgaaatcgcagcgata 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 tgtccaataactgaaacgatagctgacgtgataacacccaatcctgaaatcgcagcgata 1143
Query: 361 ggccaagcagcatatttggtctgaacggtcttaccattggacagagcagcttgcacacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 ggccaagcagcatatttggtctgaacggtcttaccattggacagagcagcttgcacacac 1083
Query: 421 gctagkg-ctcttcgaaacttgtatcgtttgttgagtaaacgatgacacgcacttgtgst 479
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 gctagtggctcttcgaaacttgtatcgtttgttgagtaaacgatgacacgcacttgtgcg 1023
Query: 480 ncgatatcaggaactgtgtacgcgacccctggaatgttaccaaccatgtcgttatcctca 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 tcgatatcaggaactgtgtacgcgacccctggaatgttaccaaccatgtcgttatcctca 963
Query: 540 tccaaagaatacgtggattttacctcgattctacctgcacttagaggacacatggaggct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 tccaaagaatacgtggattttacctcgattctacctgcacttagaggacacatggaggct 903
Query: 600 tggtccaaatcacataagttgaactcttcgttgaggacgtttagcccataaatgattaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 tggtccaaatcacataagttgaactcttcgttgaggacgtttagcccataaatgattaat 843
Query: 660 tcgatcttggcagtgacattttcgctaatggtggtagtagcatcgatatcaaacacagcg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tcgatcttggcagtgacattttcgctaatggtggtagtagcatcgatatcaaacacagcg 783
Query: 720 gtcttattatcggggaagaaagtgacttcgaagaacgacgcagaaaattgcgagtcttcc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gtcttattatcggggaagaaagtgacttcgaagaacgacgcagaaaattgcgagtcttcc 723
Query: 780 atgcaagtgagaagcgaggacgtcttgatgtgtttgagamcattggtgaacggtaaaatc 839
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 722 atgcaagtgagaagcgaggacgtcttgatgtgtttgagaccattggtgaacggtaaaatc 663
Query: 840 accaatgtcgtgagadatccgacaagcagagaaaaggcccgcatgatgacaagaacaaca 899
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 accaatgtcgtgagaaatccgacaagcagagaaaaggcccgcatgatgacaagaacaaca 603
Query: 900 agtgtatactggggrgc-gctgcagctta 927
|||||||||||||| || |||||||||||
Sbjct: 602 agtgtatactggggagcagctgcagctta 574
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4885
Number of Sequences: 1807
Number of extensions: 4885
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)